Publications of Didier Y. R. Stainier

Prieto-Garcia, C.; Matkovic, V.; Mosler, T.; Li, C.; Liang, J.; Oo, J. A.; Haidle, F.; Macinkovic, I.; Cabrera-Orefice, A.; Berkane, R. et al.; Giuliani, G.; Xu, F.; Jacomin, A.-C.; Tomaskovic, I.; Basoglu, M.; Hoffmann, M. E.; Rathore, R.; Cetin, R.; Boutguetait, D.; Bozkurt, S.; Canas, M. C. H.; Keller, M.; Busam, J.; Shah, V. J.; Wittig, I.; Kaulich, M.; Beli, P.; Galej, W. P.; Ebersberger, I.; Wang, L.; Muench, C.; Stolz, A.; Brandes, R. P.; Tse, W. K. F.; Eimer, S.; Stainier, D. Y. R.; Legewie, S.; Zarnack, K.; Mueller-McNicoll, M.; Dikic, I.: Pathogenic proteotoxicity of cryptic splicing is alleviated by ubiquitination and ER-phagy. SCIENCE 386 (6723), pp. 768 - 776 (2024)

Liu, Z.; Lu, C.; Ma, L.; Li, C.; Luo, H.; Liu, Y.; Liu, X.; Li, H.; Cui, Y.; Zeng, J. et al.; Bottasso-Arias, N.; Sinner, D.; Li, L.; Wang, J.; Stainier, D. Y. R.; Yin, W.: The T-Type Calcium Channel CACNA1H is Required for Smooth Muscle Cytoskeletal Organization During Tracheal Tubulogenesis. ADVANCED SCIENCE (2024)

Goumenaki, P.; Guenther, S.; Kikhi, K.; Looso, M.; Marin-Juez, R.; Stainier, D. Y. R.: The innate immune regulator MyD88 dampens fibrosis during zebrafish heart regeneration. NATURE CARDIOVASCULAR RESEARCH 3 (9), pp. 1158 - 1176 (2024)

Bornhorst, D.; Hejjaji, A. V.; Steuter, L.; Woodhead, N. M.; Maier, P.; Gentile, A.; Alhajkadour, A.; Larrain, O. S.; Weber, M.; Kikhi, K. et al.; Guenther, S.; Huisken, J.; Tamplin, O. J.; Stainier, D. Y. R.; Gunawan, F.: The heart is a resident tissue for hematopoietic stem and progenitor cells in zebrafish. NATURE COMMUNICATIONS 15 (1), 7589 (2024)

Gentile, A.; Albu, P. M.; Xu, Y.; Mortazavi , N.; da Silva, A.; Stainier, D. Y. R.; Gunawan, F.: Mechanical forces remodel the cardiac extracellular matrix during zebrafish development. DEVELOPMENT 151 (13), dev202310 (2024)

Gauvrit, S.; Zhao, S.; Rothbauer, U.; Stainier, D. Y. R.: A β-catenin chromobody-based probe highlights endothelial maturation during vascular morphogenesis in vivo. DEVELOPMENT 151 (11), dev202122 (2024)

Ribeiro da Silva, A.; Gunawan, F.; Boezio, G. L. M.; Faure , E.; Theron , A.; Avierinos , J.-F.; Lim, S.; Shivam, G. J.; Ramadass, R.; Guenther, S. et al.; Looso, M.; Zaffran, S.; Juan, T.; Stainier, D. Y. R.: egr3 is a mechanosensitive transcription factor gene required for cardiac valve morphogenesis. SCIENCE ADVANCES 10 (20), eadl0633 (2024)

Cardeira-da-Silva, J.; Wang, Q.; Sagvekar, P.; Mintcheva, J.; Latting, S.; Guenther, S.; Ramadass, R.; Yekelchyk, M.; Preussner, J.; Looso, M. et al.; Junker, J. P.; Stainier, D. Y. R.: Antigen presentation plays positive roles in the regenerative response to cardiac injury in zebrafish. NATURE COMMUNICATIONS 15 (1), 3637 (2024)

Albu, M.; Affolter, E.; Gentile, A.; Xu, Y.; Kikhi, K.; Howard, S.; Kuenne, C.; Priya, R.; Gunawan, F.; Stainier, D. Y. R.: Distinct mechanisms regulate ventricular and atrial chamber wall formation. NATURE COMMUNICATIONS 15 (1), 8159 (2024)

Ruijmbeek, C. W. B.; Filomena, H.; Idrees, H.; Housley, M. P.; Pestel, J.; Keller, L.; Lai, J. K. H.; Linde, J.; Willemsen , R.; Piesker, J. et al.; Al-Hassnan, Z. N.; Almesned , A.; Dalinghaus , M.; van den Bersselaar, L. M.; van Slegtenhorst, M. A.; Tessadori, F.; Bakkers, J.; van Ham, T. J.; Stainier, D.; Verhagen , J. M. A.; Reischauer, S.: Biallelic variants in FLII cause pediatric cardiomyopathy by disrupting cardiomyocyte cell adhesion and myofibril organization. JCI INSIGHT 8 (17), e168247 (2023)

Welker, J. M.; Serobyan, V.; Esfahani , E. Z.; Stainier, D. Y. R.: Partial sequence identity in a 25-nucleotide long element is sufficient for transcriptional adaptation in the Caenorhabditis elegans act-5/act-3 model. PLOS GENETICS 19 (6), e1010806 (2023)

Boezio, G. L. M.; Zhao, S.; Gollin, J.; Priya, R.; Mansingh, S.; Guenther, S.; Fukuda, N.; Gunawan, F.; Stainier, D. Y. R.: The developing epicardium regulates cardiac chamber morphogenesis by promoting cardiomyocyte growth. DISEASE MODELS & MECHANISMS 16 (5), dmm049571 (2023)

Hussmann, M.; Schulte, D.; Weischer, S.; Carlantoni, C.; Nakajima, H.; Mochizuki, N.; Stainier, D. Y. R.; Zobel, T.; Koch, M.; Schulte-Merker, S. et al.; Bautch, V. L.: Svep1 is a binding ligand of Tie1 and affects specific aspects of facial lymphatic development in a Vegfc-independent manner. ELIFE 12, e82969 (2023)

Nakajima, H.; Ishikawa, H.; Yamamoto, T.; Chiba, A.; Fukui, H.; Sako, K.; Fukumoto, M.; Mattonet, K.; Kwon, H.-B.; Hui, S. P. et al.; Dobreva, G. D.; Kikuchi, K.; Helker, C. S. M.; Stainier, D. Y. R.; Mochizuki, N.: Endoderm-derived islet1-expressing cells differentiate into endothelial cells to function as the vascular HSPC niche in zebrafish. DEVELOPMENTAL CELL 58 (3), pp. 224 - + (2023)

Morgan, K. J.; Doggett, K.; Geng, F.; Mieruszynski, S.; Whitehead, L.; Smith, K. A.; Hogan, B. M.; Simons, C.; Baillie, G. J.; Molania, R. et al.; Papenfuss, A. T.; Hall, T. E.; Ober, E. A.; Stainier, D. Y. R.; Gong, Z.; Heath, J. K.: ahctf1 and kras mutations combine to amplify oncogenic stress and restrict liver overgrowth in a zebrafish model of hepatocellular carcinoma. ELIFE 12, e73407 (2023)

Juan, T.; da Silva, A. R.; Cardoso, B.; Lim, S.; Charteau, V.; Stainier, D. Y. R.: Multiple pkd and piezo gene family members are required for atrioventricular valve formation. NATURE COMMUNICATIONS 14 (1), 214 (2023)

Jiang, Z.; El-Brolosy, M. A.; Serobyan, V.; Welker, J. M.; Retzer, N.; Dooley, C. M.; Jakutis, G.; Juan, T.; Fukuda, N.; Maischein, H.-M. et al.; Balciunas, D.; Stainier, D. Y. R.: Parental mutations influence wild-type offspring via transcriptional adaptation. SCIENCE ADVANCES 8 (47), eabj2029 (2022)

Cardeira-da-Silva, J.; Bensimon-Brito, A.; Tarasco, M.; Brandao, A. S.; Rosa, J. T.; Borbinha, J.; Almeida, P. J.; Jacinto, A.; Cancela, M. L.; Gavaia, P. J. et al.; Stainier, D. Y. R.; Laize, V.: Fin ray branching is defined by TRAP(+) osteolytic tubules in zebrafish. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 119 (48), e2209231119 (2022)

Mattonet, K.; Riemslagh, F. W.; Guenther, S.; Prummel, K. D.; Kesavan, G.; Hans, S.; Ebersberger, I.; Brand, M.; Burger, A.; Reischauer, S. et al.; Mosimann, C.; Stainier, D. Y. R.: Endothelial versus pronephron fate decision is modulated by the transcription factors Cloche/Npas4l, Tal1, and Lmo2. SCIENCE ADVANCES 8 (35), eabn2082 (2022)

Ellis, J. L.; Evason, K. J.; Zhang, C.; Fourman, M. N.; Liu, J.; Ninov, N.; Delous, M.; Vanhollebeke, B.; Fiddes, I.; Otis, J. P. et al.; Houvras, Y.; Farber, S. A.; Xu, X.; Lin, X.; Stainier, D. Y. R.; Yin, C.: A missense mutation in the proprotein convertase gene furinb causes hepatic cystogenesis during liver development in zebrafish. HEPATOLOGY COMMUNICATIONS (2022)