Publications of Johnny Kim

Maroli, G.; Scha, A.; Guenther, S.; -Gonzalez, C. G.; Rupp, S.; Schlierbach, H.; Chen, Y.; Graumann, J.; Wietelmann, A.; Kim, J. et al.; Braun, T.: Inhibition of autophagy prevents cardiac dysfunction at early stages of cardiomyopathy in Bag3-deficient hearts. JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY 193, pp. 53 - 66 (2024)

Zhu, Y.; Ackers-Johnson, M.; Shanmugam, M. K.; Pakkiri, L. S.; Drum, C. L.; Chen, Y.; Kim, J.; Paltzer, W. G.; Mahmoud, A. I.; Tan, W. L. W. et al.; Lee, M. C. J.; Jiang, J.; Luu, D. A. T.; Ng, S. L.; Li, P. Y. Q.; Wang, A.; Qi, R.; Ong, G. J. X.; Ng, T. Y.; Haigh, J. J.; Tiang, Z.; Richards, A. M.; Foo, R. S. Y.: Asparagine Synthetase Marks a Distinct Dependency Threshold for Cardiomyocyte Dedifferentiation. CIRCULATION 149 (23), pp. 1833 - 1851 (2024)

Vega-Sendino, M.; Luettmann, F. F.; Olbrich, T.; Chen, Y.; Kuenne, C.; Stein, P.; Tillo, D.; Carey, G. I.; Zhong, J.; Savy, V. et al.; Radonova, L.; Lu, T.; Saykali, B.; Kim, K.-P.; Domingo, C. N.; Schueler, L.; Guenther, S.; Bentsen, M.; Bosnakovski, D.; Schoeler, H.; Kyba, M.; Maity, T. K.; Jenkins, L. M.; Looso, M.; Williams, C. J.; Kim, J.; Ruiz, S.: The homeobox transcription factor DUXBL controls exit from totipotency. NATURE GENETICS (56), pp. 697 - 709 (2024)

Bosnakovski, D.; Toso, E. A.; Ener, E. T.; Gearhart, M. D.; Yin, L.; Luttmann, F. F.; Magli, A.; Shi, K.; Kim, J.; Aihara, H. et al.; Kyba, M.: Antagonism among DUX family members evolved from an ancestral toxic single homeodomain protein. ISCIENCE 26 (10), 107823 (2023)

Kim, M.; Park, J.; Kim, S.; Han, D. W.; Shin, B.; Scholer, H.; Kim, J.; Kim, K.-P.: Generation of Induced Pluripotent Stem Cells from Lymphoblastoid Cell Lines by Electroporation of Episomal Vectors. INTERNATIONAL JOURNAL OF STEM CELLS (2022)

Chen, Y.; Luttmann, F. F.; Schoger, E.; Schoeler, H. R.; Zelarayan, L. C.; Kim, K.-P.; Haigh, J. J.; Kim, J.; Braun, T.: Reversible reprogramming of cardiomyocytes to a fetal state drives heart regeneration in mice. SI 373 (6562), pp. 1537 - 1540 (2021)

Sreenivasan, K.; Rodriguez-delaRosa, A.; Kim, J.; Mesquita, D.; Segales, J.; Gomez-del Arco, P.; Espejo, I.; Ianni, A.; Di Croce, L.; Relaix, F. et al.; Miguel Redondo, J.; Braun, T.; Serrano, A. L.; Perdiguero, E.; Munoz-Canoves, P.: CHD4 ensures stem cell lineage fidelity during skeletal muscle regeneration. STEM CELL REPORTS 16 (9), pp. 2089 - 2098 (2021)

Kim, K.-P.; Li, C.; Bunina, D.; Jeong, H.-W.; Ghelman, J.; Yoon, J.; Shin, B.; Park, H.; Han, D. W.; Zaugg, J. B. et al.; Kim, J.; Kuhlmann, T.; Adams, R. H.; Noh, K.-M.; Goldman, S. A.; Schoeler, H. R.: Donor cell memory confers a metastable state of directly converted cells. CELL STEM CELL 28 (7), pp. 1291 - 1306 (2021)

Tan, D. S.; Chen, Y.; Gao, Y.; Bednarz, A.; Wei, Y.; Malik, V.; Ho, D. H.-H.; Weng, M.; Ho, S. Y.; Srivastava, Y. et al.; Velychko, S.; Yang, X.; Fan, L.; Kim, J.; Graumann, J.; Stormo, G. D.; Braun, T.; Yan, J.; Schoeler, H. R.; Jauch, R.: Directed Evolution of an Enhanced POU Reprogramming Factor for Cell Fate Engineering. MOLECULAR BIOLOGY AND EVOLUTION 38 (7), pp. 2854 - 2868 (2021)

Kim, K.-P.; Han, D. W.; Kim, J.; Schoeler, H. R.: Biological importance of OCT transcription factors in reprogramming and development. EXPERIMENTAL AND MOLECULAR MEDICINE (2021)

Kim, K.-P.; Choi, J.; Yoon, J.; Bruder, J. M.; Shin, B.; Kim, J.; Arauzo-Bravo, M. J.; Han, D.; Wu, G.; Han, D. W. et al.; Kim, J.; Cramer, P.; Schoeler, H. R.: Permissive epigenomes endow reprogramming competence to transcriptional regulators. NATURE CHEMICAL BIOLOGY 17 (1), pp. 47 - 56 (2021)

Kim, K.-P.; Yoon, J.; Kim, J.; Roepke, A.; Shin, B.; Han, D. W.; Greber, B.; Schoeler, H. R.: Generation of a human iPSC line (MPIi007-A) from a patient with Metachromatic leukodystrophy. STEM CELL RESEARCH 48, 101993 (2020)

Kim, K.-P.; Wu, Y.; Yoon, J.; Adachi, K.; Wu, G.; Velychko, S.; Maccarthy, C. M.; Shin, B.; Roepke, A.; Arauzo-Bravo, M. J. et al.; Stehling, M.; Han, D. W.; Gao, Y.; Kim, J.; Gao, S.; Schoeler, H. R.: Reprogramming competence of OCT factors is determined by transactivation domains. SCIENCE ADVANCES 6 (36), eaaz7364 (2020)

Bentsen, M.; Goymann, P.; Schultheis, H.; Klee, K.; Petrova, A.; Wiegandt, R.; Fust, A.; Preussner, J.; Kuenne, C.; Braun, T. et al.; Kim, J.; Looso, M.: ATAC-seq footprinting unravels kinetics of transcription factor binding during zygotic genome activation. NATURE COMMUNICATIONS 11 (1), 4267 (2020)

Sreenivasan, K.; Ianni, A.; Kuenne, C.; Strilic, B.; Guenther, S.; Perdiguero, E.; Krueger, M.; Spuler, S.; Offermanns, S.; Gomez-del Arco, P. et al.; Miguel Redondo, J.; Munoz-Canoves, P.; Kim, J.; Braun, T.: Attenuated Epigenetic Suppression of Muscle Stem Cell Necroptosis Is Required for Efficient Regeneration of Dystrophic Muscles. CELL REPORTS 31 (7), UNSP 107652 (2020)

Moradi, S.; Mahdizadeh, H.; Saric, T.; Kim, J.; Harati, J.; Shahsavarani, H.; Greber, B.; Moore, J. B.: Research and therapy with induced pluripotent stem cells (iPSCs): social, legal, and ethical considerations. STEM CELL RESEARCH & THERAPY 10 (1), 341 (2019)

Preussner, J.; Zhong, J.; Looso, M.; Braun, T.; Kim, J.: Connect-four: genomic analyses of regenerating stem cells identifies zygotic Dux factors as tumor initiators. MOLECULAR & CELLULAR ONCOLOGY 6 (2), e1565469 (2019)

Weber, J.; de la Rosa, J.; Grove, C. S.; Schick, M.; Rad, L.; Baranovt, O.; Strong, A.; Pfaus, A.; Friedrich, M. J.; Engleitner, T. et al.; Lersch, R.; Oellinger, R.; Grau, M.; Menendez, I. G.; Martella, M.; Kohlhofer, U.; Banerjee, R.; Turchaninova, M. A.; Scherger, A.; Hoffman, G. J.; Hess, J.; Kuh, L. B.; Ammon, T.; Kim, J.; Schneider, G.; Unger, K.; Zimber-Strobl, U.; Heikenwaelder, M.; Schmidt-Supprian, M.; Yang, F.; Saur, D.; Liu, P.; Steiger, K.; Chudakov, D. M.; Lenz, G.; Quintanilla-Martinez, L.; Keller, U.; Vassiliou, G. S.; Cadinanos, J.; Bradley, A.; Rad, R.: PiggyBac transposon tools for recessive screening identify B-cell lymphoma drivers in mice. NATURE COMMUNICATIONS 10, 1415 (2019)

Meier-Soelch, J.; Jurida, L.; Weber, A.; Newel, D.; Kim, J.; Braun, T.; Schmitz, M. L.; Kracht, M.: RNAi-Based Identification of Gene-Specific Nuclear Cofactor Networks Regulating Interleukin-1 Target Genes. FRONTIERS IN IMMUNOLOGY 9, 775 (2018)

Preussner, J.; Zhong, J.; Sreenivasan, K.; Guenther, S.; Engleitner, T.; Kuenne, C.; Glatzel, M.; Rad, R.; Looso, M.; Braun, T. et al.; Kim, J.: Oncogenic Amplification of Zygotic Dux Factors in Regenerating p53-Deficient Muscle Stem Cells Defines a Molecular Cancer Subtype. CELL STEM CELL 23 (6), pp. 794 - + (2018)