Danioheart atlas

Danioheart atlas

Single-cell transcriptomic profiling of the developing zebrafish heart

We have profiled the transcriptome of over 34,000 cells from dissected hearts encompassing 10 development stages, ranging from 25 hours to 60 days post-fertilization. We identified and sub-clustered all known cardiac cell types, including myocardial, endocardial, epicardial, and fibroblast-like cells.

Our goal is for the Danioheart atlas to serve as a valuable resource for the scientific community providing a foundation for an enhanced understanding of the mechanisms underlying heart development.

Click below to access the datasets!

Whole heart

Whole heart

Myocardium

Myocardium

Endocardium

Endocardium

Epicardium

Epicardium

Fibroblasts

Fibroblasts

Other cell types

Other cell types

Feel free to contact us for further enquiries: Dr. Marco TarascoProf. Didier Stainier.

 

Click here to access the whole team.

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