Publications

Campos, D.; Girgis, M.; Yang , Q.; Zong, G.; Goldman, R.; Wang , L.-X.; Sanda, M.: "Ghost" Fragment Ions in Structure and Site-Specific Glycoproteomics Analysis. ANALYTICAL CHEMISTRY (Volume 95, Issue 27), pp. 10145 - 10148 (2023)

Voelkel, S.; Tarawneh, T. S.; Sacher, L.; Bhagwat, A. M.; Karim, I.; Mack, H. I. D.; Wiesmann, T.; Beutel, B.; Hoyer, J.; Keller, C. et al.; Renz, H.; Burchert, A.; Neubauer, A.; Graumann, J.; Skevaki, C.; Mack, E. K. M.: Serum proteomics hint at an early T-cell response and modulation of SARS-CoV-2-related pathogenic pathways in COVID-19-ARDS treated with Ruxolitinib. FRONTIERS IN MEDICINE 10, 1176427 (2023)

Benicky, J.; Sanda, M.; Panigrahi, A.; Liu, J.; Wang, Z.; Pagadala, V.; Su, G.; Goldman, R.: A 6-O-endosulfatase activity assay based on synthetic heparan sulfate oligomers. GLYCOBIOLOGY (2023)

Li, R.; Shao, J.; Jin, Y. J.; Haruya, K.; Ong, Y. T.; Troidl, K.; Quan, Q.; Wang, L.; Bonnavion, R.; Wietelmann, A. et al.; Helmbacher , F.; Potente, M.; Graumann, J.; Wettschureck, N.; Offermanns, S.: Endothelial FAT1 inhibits angiogenesis by controlling YAP/TAZ protein degradation via E3 ligase MIB2. NATURE COMMUNICATIONS 14 (1), 1980 (2023)

Selvanesan, B. C.; Varghese, S.; Andrys-Olek, J.; Arriaza, R. H.; Prakash, R.; Tiwari, P. B.; Hupalo, D.; Gusev, Y.; Patel, M. N.; Contente, S. et al.; Sanda, M.; Uren, A.; Wilkerson, M. D.; Dalgard, C. L.; Shimizu, L. S.; Chruszcz, M.; Borowski, T.; Upadhyay, G.: Lymphocyte antigen 6K signaling to aurora kinase promotes advancement of the cell cycle and the growth of cancer cells, which is inhibited by LY6K-NSC243928 interaction. CANCER LETTERS 558, 216094 (2023)

Ojasalu, K.; Lieber, S.; Sokol, A.; Nist, A.; Stiewe, T.; Bullwinkel, I.; Finkernagel, F.; Reinartz, S.; Mueller-Bruesselbach, S.; Grosse, R. et al.; Graumann, J.; Mueller, R.: The lysophosphatidic acid-regulated signal transduction network in ovarian cancer cells and its role in actomyosin dynamics, cell migration and entosis. THERANOSTICS 13 (6), pp. 1921 - 1948 (2023)

Sanda, M.; Yang, Q.; Zong, G.; Chen, H.; Zheng, Z.; Dhani, H.; Khan, K.; Kroemer, A.; Wang, L.-X.; Goldman, R.: LC-MS/MS-PRM Quantification of IgG Glycoforms Using Stable Isotope Labeled IgG1 Fc Glycopeptide Standard. JOURNAL OF PROTEOME RESEARCH (2023)

Sivakumar, S.; Lieber, S.; Librizzi, D.; Keber, C.; Sommerfeld, L.; Finkernagel, F.; Roth, K.; Reinartz, S.; Bartsch, J. W.; Graumann, J. et al.; Mueller-Bruesselbach, S.; Mueller, R.: Basal cell adhesion molecule promotes metastasis-associated processes in ovarian cancer. CLINICAL AND TRANSLATIONAL MEDICINE 13 (1), e1176 (2023)

Panigrahi , A.; Zhang, L.; Benicky , J.; Sanda, M.; Ahn, J.; Goldman, R.: A multiplexed microflow LC-MS/MS-PRM assay for serologic quantification of IgG N- and HPX O- glycoforms in liver fibrosis. SCIENTIFIC REPORTS 13 (1) (2023)

Panigrahi, A.; Zhang, L.; Benicky, J.; Sanda, M.; Ahn, J.; Goldman, R.: A multiplexed microflow LC-MS/MS-PRM assay for serologic quantification of IgG N- and HPX O-glycoforms in liver fibrosis. SCIENTIFIC REPORTS 13 (1), 606 (2023)

Uszczynska-Ratajczak, B.; Sugunan, S.; Kwiatkowska, M.; Migdal, M.; Carbonell-Sala, S.; Sokol, A.; Winata, C. L.; Chacinska, A.: Profiling subcellular localization of nuclear-encoded mitochondrial gene products in zebrafish. LIFE SCIENCE ALLIANCE 6 (1), e202201514 (2023)

Garcia-Gonzalez, C.; Dieterich, C.; Maroli, G.; Wiesnet, M.; Wietelmann, A.; Li, X.; Yuan, X.; Graumann, J.; Stellos, K.; Kubin, T. et al.; Schneider, A.; Braun, T.: ADAR1 Prevents Autoinflammatory Processes in the Heart Mediated by IRF7. CIRCULATION RESEARCH 131 (7), pp. 580 - 597 (2022)

Diniz, F.; Azevedo, M.; Sousa, F.; Osorio, H.; Campos, D.; Sampaio, P.; Gomes, J.; Sarmento, B.; Reis, C. A.: Polymeric nanoparticles targeting Sialyl-Tn in gastric cancer: A live tracking under flow conditions. MATERIALS TODAY BIO 16, 100417 (2022)

Woods, M. L.; Weiss, A.; Sokol, A. M.; Graumann, J.; Boettger, T.; Richter, A. M.; Schermuly, R. T.; Dammann, R. H.: Epigenetically silenced apoptosis-associated tyrosine kinase (AATK) facilitates a decreased expression of Cyclin D1 and WEE1, phosphorylates TP53 and reduces cell proliferation in a kinase-dependent manner. CANCER GENE THERAPY (2022)

Campos, D.; Girgis, M.; Sanda, M.: Site-specific glycosylation of SARS-CoV-2: Big challenges in mass spectrometry analysis. PROTEOMICS, e2100322 (2022)

Hammoud, M. K.; Dietze, R.; Pesek, J.; Finkernagel, F.; Unger, A.; Bieringer, T.; Nist, A.; Stiewe, T.; Bhagwat, A. M.; Nockher, W. A. et al.; Reinartz, S.; Muller-Brusselbach, S.; Graumann, J.; Mueller, R.: Arachidonic acid, a clinically adverse mediator in the ovarian cancer microenvironment, impairs JAK-STAT signaling in macrophages by perturbing lipid raft structures. MOLECULAR ONCOLOGY (2022)

Panigrahi, A.; Benicky, J.; Wei, R.; Ahn, J.; Goldman, R.; Sanda, M.: A Rapid LC-MS/MS-PRM Assay for Serologic Quantification of Sialylated O-HPX Glycoforms in Patients with Liver Fibrosis. MOLECULES 27 (7), 2213 (2022)

Kudryashova V, T.; Dabral, S.; Nayakanti, S.; Ray, A.; Goncharov, D. A.; Avolio, T.; Shen, Y.; Rode, A.; Pena, A.; Jiang, L. et al.; Lin, D.; Baust, J.; Bachman, T. N.; Graumann, J.; Ruppert, C.; Guenther, A.; Schmoranzer, M.; Grobs, Y.; Lemay, S. E.; Tremblay, E.; Breuils-Bonnet, S.; Boucherat, O.; Mora, A. L.; DeLisser, H.; Zhao, J.; Zhao, Y.; Bonnet, S.; Seeger, W.; Pullamsetti, S. S.; Goncharova, E. A.: Noncanonical HIPPO/MST Signaling via BUB3 and FOXO Drives Pulmonary Vascular Cell Growth and Survival. CIRCULATION RESEARCH 130 (5), pp. 760 - 778 (2022)

Gadd, D. A.; Hillary, R. F.; McCartney, D. L.; Zaghlool, S. B.; Stevenson, A. J.; Cheng, Y.; Fawns-Ritchie, C.; Nangle, C.; Campbell, A.; Flaig, R. et al.; Harris, S. E.; Walker, R. M.; Shi, L.; Tucker-Drob, E. M.; Gieger, C.; Peters, A.; Waldenberger, M.; Graumann, J.; McRae, A. F.; Deary, I. J.; Porteous, D. J.; Hayward, C.; Visscher, P. M.; Cox, S. R.; Evans, K. L.; McIntosh, A. M.; Suhre, K.; Marioni, R. E.: Epigenetic scores for the circulating proteome as tools for disease prediction. ELIFE 11, e71802 (2022)

Sarvari, P.; Rasouli, S. J.; Allanki, S.; Stone, O. A.; Sokol, A. M.; Graumann, J.; Stainier, D. Y. R.: The E3 ubiquitin-protein ligase Rbx1 regulates cardiac wall morphogenesis in zebrafish. DEVELOPMENTAL BIOLOGY 480, pp. 1 - 12 (2021)