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Journal Article (40)

2020
Journal Article
Bhagwat, A. M.; Graumann, J.; Wiegandt, R.; Bentsen, M.; Welker, J.; Kuenne, C.; Preussner, J.; Braun, T.; Looso, M.: multicrispr: gRNA design for prime editing and parallel targeting of thousands of targets. LIFE SCIENCE ALLIANCE 3 (11), e202000757 (2020)
Journal Article
Beisaw, A.; Kuenne, C.; Guenther, S.; Dallmann, J.; Wu, C.-C.; Bentsen, M.; Looso, M.; Stainier, D. Y. R.: AP-1 Contributes to Chromatin Accessibility to Promote Sarcomere Disassembly and Cardiomyocyte Protrusion During Zebrafish Heart Regeneration. CIRCULATION RESEARCH 126 (12), pp. 1760 - 1778 (2020)
Journal Article
Bentsen, M.; Goymann, P.; Schultheis, H.; Klee, K.; Petrova, A.; Wiegandt, R.; Fust, A.; Preussner, J.; Kuenne, C.; Braun, T. et al.; Kim, J.; Looso, M.: ATAC-seq footprinting unravels kinetics of transcription factor binding during zygotic genome activation. NATURE COMMUNICATIONS 11 (1), 4267 (2020)
Journal Article
Pflueger-Mueller, B.; Oo, J. A.; Heering, J.; Warwick, T.; Proschak, E.; Guenther, S.; Looso, M.; Rezende, F.; Fork, C.; Geisslinger, G. et al.; Thomas, D.; Gurke, R.; Steinhilber, D.; Schulz, M.; Leisegang, M. S.; Brandes, R. P.: The endocannabinoid anandamide has an anti-inflammatory effect on CCL2 expression in vascular smooth muscle cells. BASIC RESEARCH IN CARDIOLOGY 115 (3), 34 (2020)
Journal Article
Tellkamp, F.; Lang, F.; Ibanez, A.; Abraham, L.; Quezada, G.; Guenther, S.; Looso, M.; Tann, F. J.; Mueller, D.; Cemic, F. et al.; Hemberger, J.; Steinfartz, S.; Krueger, M.: Proteomics of Galapagos Marine Iguanas Links Function of Femoral Gland Proteins to the Immune System. MOLECULAR & CELLULAR PROTEOMICS 19 (9) (2020)
2019
Journal Article
Frickmann, H.; Kuenne, C.; Hagen, R. M.; Podbielski, A.; Normann, J.; Poppert, S.; Looso, M.; Kreikemeyer, B.: Next-generation sequencing for hypothesis-free genomic detection of invasive tropical infections in poly-microbially contaminated, formalin-fixed, paraffin-embedded tissue samples - a proof-of-principle assessment. BMC MICROBIOLOGY 19, 75 (2019)
Journal Article
Helker, C. S. M.; Mullapudi, S.-T.; Mueller, L. M.; Preussner, J.; Tunaru, S.; Skog, O.; Kwon, H.-B.; Kreuder, F.; Lancman, J. J.; Bonnavion, R. et al.; Dong, P. D. S.; Looso, M.; Offermanns, S.; Korsgren, O.; Spagnoli, F. M.; Stainier, D. Y. R.: A whole organism small molecule screen identifies novel regulators of pancreatic endocrine development. DEVELOPMENT 146 (14), UNSP dev172569 (2019)
Journal Article
Kiweler, M.; Looso, M.; Graumann, J.: MARMoSET - Extracting Publication-ready Mass Spectrometry Metadata from RAW Files. MOLECULAR & CELLULAR PROTEOMICS 18 (8), pp. 1700 - 1702 (2019)
Journal Article
Leisegang, M. S.; Bibli, S.-I.; Guenther, S.; Pflueger-Mueller, B.; Oo, J. A.; Hoeper, C.; Seredinski, S.; Yekelchyk, M.; Schmitz-Rixen, T.; Schuermann, C. et al.; Hu, J.; Looso, M.; Sigala, F.; Boon, R. A.; Fleming, I.; Brandes, R. P.: Pleiotropic effects of laminar flow and statins depend on the Kruppel-like factor-induced lncRNA MANTIS. EUROPEAN HEART JOURNAL 40 (30), pp. 2523 - 2533 (2019)
Journal Article
Leisegang, M. S.; Gu, L.; Preussner, J.; Guenther, S.; Hitzel, J.; Ratiu, C.; Weigert, A.; Chen, W.; Schwarz, E. C.; Looso, M. et al.; Fork, C.; Brandes, R. P.: The histone demethylase PHF8 facilitates alternative splicing of the histocompatibility antigen HLA-G. FEBS LETTERS 593 (5), pp. 487 - 498 (2019)
Journal Article
Preussner, J.; Zhong, J.; Looso, M.; Braun, T.; Kim, J.: Connect-four: genomic analyses of regenerating stem cells identifies zygotic Dux factors as tumor initiators. MOLECULAR & CELLULAR ONCOLOGY 6 (2), e1565469 (2019)
Journal Article
Schultheis, H.; Kuenne, C.; Preussner, J.; Wiegandt, R.; Fust, A.; Bentsen, M.; Looso, M.: WIlsON: Web-based Interactive Omics VisualizatioN. BIOINFORMATICS 35 (6), pp. 1055 - 1057 (2019)
2018
Journal Article
Jia, G.; Preussner, J.; Chen, X.; Guenther, S.; Yuan, X.; Yekelchyk, M.; Kuenne, C.; Looso, M.; Zhou, Y.; Teichmann, S. et al.; Braun, T.: Single cell RNA-seq and ATAC-seq analysis of cardiac progenitor cell transition states and lineage settlement. NATURE COMMUNICATIONS 9, 4877 (2018)
Journal Article
Josipovic, I.; Pflueger, B.; Fork, C.; Vasconez, A. E.; Oo, J. A.; Hitzel, J.; Seredinski, S.; Gamen, E.; zu Heringdorf, D. M.; Chen, W. et al.; Looso, M.; Pullamsetti, S. S.; Brandes, R. P.; Leisegang, M. S.: Long noncoding RNA LISPR1 is required for S1P signaling and endothelial cell function. JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY 116, pp. 57 - 68 (2018)
Journal Article
Kim, H.-T.; Yin, W.; Jin, Y.-J.; Panza, P.; Gunawan, F.; Grohmann, B.; Buettner, C.; Sokol, A. M.; Preussner, J.; Guenther, S. et al.; Kostin, S.; Ruppert, C.; Bhagwat, A. M.; Ma, X.; Graumann, J.; Looso, M.; Guenther, A.; Adelstein, R. S.; Offermanns, S.; Stainier, D. Y. R.: Myh10 deficiency leads to defective extracellular matrix remodeling and pulmonary disease. NATURE COMMUNICATIONS 9, 4600 (2018)
Journal Article
Preussner, J.; Zhong, J.; Sreenivasan, K.; Guenther, S.; Engleitner, T.; Kuenne, C.; Glatzel, M.; Rad, R.; Looso, M.; Braun, T. et al.; Kim, J.: Oncogenic Amplification of Zygotic Dux Factors in Regenerating p53-Deficient Muscle Stem Cells Defines a Molecular Cancer Subtype. CELL STEM CELL 23 (6), pp. 794 - + (2018)
Journal Article
Rezende, F.; Moll, F.; Walter, M.; Helfinger, V.; Hahner, F.; Janetzko, P.; Ringel, C.; Weigert, A.; Fleming, I.; Weissmann, N. et al.; Kuenne, C.; Looso, M.; Rieger, M. A.; Nawroth, P.; Fleming, T.; Brandes, R. P.; Schroder, K.: The NADPH organizers NoxO1 and p47phox are both mediators of diabetes-induced vascular dysfunction in mice. REDOX BIOLOGY 15, pp. 12 - 21 (2018)
Journal Article
Riddell, M.; Nakayama, A.; Hikita, T.; Mirzapourshafiyi, F.; Kawamura, T.; Pasha, A.; Li, M.; Masuzawa, M.; Looso, M.; Steinbacher, T. et al.; Ebnet, K.; Potente, M.; Hirose, T.; Ohno, S.; Fleming, I.; Gattenloehner, S.; Aung, P. P.; Thuy, P.; Yamasaki, O.; Yanagi, T.; Umemura, H.; Nakayama, M.: aPKC controls endothelial growth by modulating c-Myc via FoxO1 DNA-binding ability. NATURE COMMUNICATIONS 9, 5357 (2018)
Journal Article
Worzfeld, T.; Finkernagel, F.; Reinartz, S.; Konzer, A.; Adhikary, T.; Nist, A.; Stiewe, T.; Wagner, U.; Looso, M.; Graumann, J. et al.; Mueller, R.: Proteotranscriptomics Reveal Signaling Networks in the Ovarian Cancer Microenvironment. MOLECULAR & CELLULAR PROTEOMICS 17 (2), pp. 270 - 289 (2018)
Journal Article
Yin, W.; Kim, H.-T.; Wang, S.; Gunawan, F.; Wang, L.; Kishimoto, K.; Zhong, H.; Roman, D.; Preussner, J.; Guenther, S. et al.; Graef, V.; Buettner, C.; Grohmann, B.; Looso, M.; Morimoto, M.; Mardon, G.; Offermanns, S.; Stainier, D. Y. R.: The potassium channel KCNJ13 is essential for smooth muscle cytoskeletal organization during mouse tracheal tubulogenesis. NATURE COMMUNICATIONS 9, 2815 (2018)
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