Die Forschung
Abteilung I
Entwicklung und Umbau des HerzensProf. Dr. Dr. Thomas Braun
Abteilung II
PharmakologieProf. Dr. Stefan Offermanns
Abteilung III
Genetik der EntwicklungDr. Didier Stainier
Abteilung IV
Entwicklung und Umbau der LungeProf. Dr. Werner Seeger
Informationen für
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Education:
| 06.2010 | Promotion (Dr. rer. nat) at the Justus Liebig University of Gießen |
| Since 2007 | Employment as Head of Bioinformatics Service Facility at the Max Planck Institute for Heart and Lung Research |
| Employment as Head of IT Service Facility at the Max Planck Institute for Heart and Lung Research | |
| 2006 - 2010 | Thesis: Bioinformatisch unterstützte Hochdurchsatz-Analyse molekularbiologischer und zellbiologischer Prozesse der Regenerationsvorgänge im Herzen des Molches Notophthalmus viridescens (Bioinformatics based high throughput analysis of the regenerating newt heart (Notophthalmus viridescens) on the molecular and cellular level) |
| 2003 - 2006 | Study of Bioinformatics at the University of Applied Sciences Gießen-Friedberg |
| Thesis: Filterung und Verifizierung von Signalen niedriger Intensität auf cDNA Microarrays (Filtering and verification of low intensity spots on cDNA microarrays) | |
| 2000 - 2003 | Professional education as Mathematisch-technischer Assistent at the RWTH Aachen squired by study of Technomathematik at the University of Applied Sciences Jülich |
Teaching:
Justus Liebig Universität Gießen:
Practical course and seminar in Bioinformatics 2009
Fachhochschule Gießen-Friedberg:
Lecture Instrumentelle Bioanalytik (since 2009)
Publications:
Looso M., Borchardt T., Krüger M., Braun T.: Advanced identification of proteins in uncharacterized proteomes by pulsed in vivo SILAC. Molecular and Cellular Proteomics, 2010; doi:10.1074
Borchardt T, Looso M, Bruckskotten M, Weis P, Kruse J, Braun T: Analysis of newly established EST databases reveals similarities between heart regeneration in newt and fish. BMC Genomics, 2010; 11(1):4.
Bruckskotten M., Looso M., Cemic F., Konzer A., Hemberger J., Krüger M., Braun T.:PCA2GO: a new multivariate statistics based method to identify highly expressed GO-Terms, BMC Bioinformatics 2010, 11:336
Conferences:
Poster presentation at "Regeneration Meeting 2006" in Ascona (September 2006)
Gene expression profiling of regenerating hearts and limbs in the newt Notophthalmus viridescens
Members of the Max-Planck-Institute for Heart and Lung Research Bad Nauheim:
Thilo Borchardt, Mario Looso, Patrick Weiss, Julia Kruse, Thomas Braun
Members of the Center for Cardiovascular Research, 10115 D-Berlin:
Henning Witt, Patricia Ruiz
Poster presentation at "Proteomics Forum" in Berlin (April 2009) Indirect non-saturated SILAC-based mass spectrometry to identify proteins driving organ regeneration of newts
Max-Planck-Institute for Heart and Lung Research, Bad Nauheim, Germany:
Mario Looso, Marcus Krüger, Thilo Borchardt, Thomas Braun
Poster presentation at „German Conference on Bioinformatics” in Halle (September 2009) A Gene Ontology based analysis of high-throughput data via a multivariate approach
Max-Planck-Institute for Heart and Lung Research, Bad Nauheim, Germany:
Marc Bruckskotten, Mario Looso, Anne Konzer, Thomas Braun
Fachhochschule Gießen Friedberg, Institut für Biochemische Verfahren und Analysen (IBVA):
Franz Cemic
Poster presentation at „ASMS conference” in Salt Lake City (June 2010) Quantitative proteome analysis of the regenerating newt heart by pulsed in vivo SILAC
Max-Planck-Institute for Heart and Lung Research, Bad Nauheim, Germany:
Mario Looso, Thilo Borchardt, Marcus Krüger, Anne Konzer, Christian Michel and Thomas Braun